Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADRLNVAERLAEGRPAAEHTQSYVRACHLVGYQHPDLTAYPAQI-H-DWYGSEDGLDLHALDADCA-QLRAAASVLMEAL-RMERSQVAVLAAAWTGSGADAAVHFVQRHCETGNSVVTEVRAAAQRCESLRDNLWQLVDSKVATAIAIDERALAQR---PAWLAAAEA-------LTTEGADRPTAVEVVRQQIQPYVDDDVRNDWLTTMRSTTAGVAASYDAVTDQLASAPRAHFEIPDDLGPGRQPSPASVPAQPSATAAITPAAALPPPDPVPAVT--SRPVTPSDFGSAPGDGSATPAGV-GSAGGFGDAGGTGGLGGFAGLAGLANRIVDAVDSLLGSVAEQLGDPLAADNPPGAVDPFAEDAADNADDGDDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAEEATLPPVAEPPPPAAPPVAEPPPPVAAPAPPGAPEPANGPSPEALSEGATPCEIAADELPQAGP |
| 1O9G Chain:A ((2-250)) | --------------------------------------SAYRHAVERMDSSDLACGVVLHSAPGYPAFPVRLATEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPL--ELAAKNLA-LLSPAGLTARELERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRT----------ADVFD--PRALSAVLAG--SAPDVVLTDLPYGERTHWE-------------GQVPGQPVAGLLRSLASALPAH-AVIAVTDRSRKIPVAPVKALERLKIGTRSAVMVRAADVLEAGP---------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 31527 for 1829 contacts (17.2/contact) +
2D Compatibility (PS) -24436 + (NN) -7684 + (LL) 8152
1D Compatibility (HY) 6800 + (ID) 1000
Total energy: 13359.0 ( 7.30 by residue)
QMean score : 0.093
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