Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPGRWSAETRLALVRRARRMNRALAQAFPHVY---CELDFTTPLELAVATILSAQSTDKRVNLTTPALFARYRTARDYAQADRTELESLIRPTGFYRNKAASLIGLGQALVERFGGEVPATMDKLVTLPGVGRKTANVILGNAFGIPGITVDTHFGRLVRRWRWTTAE-----DPVKVEQAVGELIERKEWTLLSHRVIFHGRRVCHARRPACGVCVLAKDCPSFGLGPTEPLLAAPLVQGPETDHLLALAGL
3FSP Chain:A ((11-225))
--------------FPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYS-RVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVA-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3FSP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109073 for 1649 contacts (-66.1/contact) +
2D Compatibility (PS) -21842 + (NN) -10847 + (LL) 2716
1D Compatibility (HY) -11600 + (ID) 2700
Total energy: -153346.0 ( -92.99 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_3FSP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FSP-query.scw
PDB file :
Tito_Scwrl_3FSP.pdb
: