Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFAS-ARSQGRKLAFRGQ------------EIEVEDAE--TADPSGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAH--R------RPKGIIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLAGSLVDDGSGETDEDQKLRFESRKILGI-P---DLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLDGA--------------TGVQLVD-VPTPL--AAA-GVDESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELLTADL |
| 1YS4 Chain:A ((7-352)) | MKIKVGVLGATGSVGQRFVQLLAD--HPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVFSALPSDLAKKFEPEFAKEGKLIFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRGWDGAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYNGVPS-------------------------------MAILDNLIPFIKNE---EEK---MQTESLKLLGTLKDGKVELANFKISASCNRVAVIDGHTESIFVKTKEGAEPEEIKEVMDKFDPLKDLNLPTYAKPIVIREEIDRPQPRLDRNEGNGMSIVVGRIRKDPI----FDVKYTALEHNTIRGAAGASVLNAEYFVKK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YS4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101446 for 2639 contacts (-38.4/contact) +
2D Compatibility (PS) -31931 + (NN) -11267 + (LL) 1908
1D Compatibility (HY) -13200 + (ID) 4450
Total energy: -160386.0 ( -60.78 by residue)
QMean score : 0.411
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