Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKNARYAWRLSLGGLLLGLLACAVYLLAVPLGFKYGEIQVGHGLEHEGRIAWDAAGVPHIRAQSLEDGYFLLGYSHARDRLWQMEFARRYAGGTLSEVFGAKTLPMDRFARTLGFRRTAEGIYANLDAPTRVLLQRYSDGINAYLELAPAALPLEFSLVRHERPGPWGPVDSLSLHLLYSWTLSANLGMQLQRLALAEHLDLARINEVFAPYPGERPPATRDYASLYRSLHGTPDAGKLLGQLPGSNVEGIGSNNWVVSASRSATGKPLLANDPHLRLTNPAA-FYLASLKIPGLSLTGANFAGAPLFVIGHNQRI-AWGYTNTG-SHIQDAYLERVDPQDPRRYLTPDGYRPFETRLERIAVRDG----ETVSLEVRSTRHGPVISDIYEPARLPQAQRDRLVIALAWTGLDRHDKTF-PSLLAI-NRAEGWEQFLDAAA-NF-GVPPQNMVYADVEGNIGYVSAGRVPLRGADDDLHGLAPSPGWESRYDWVGYVPESAKPRSLNPREGFIATANQRIVPPDNAFDFGHDWVLPYRYD------RIREWLGG-PGQRTLE-DSL-ELQNDEFSS-VMASLLPKMLEQVSDPELRASEAFALLQGWNHQAAADLAAPLIAGYWVRAFTRELLQPRIGTQLLASGWNQRNYDGFLRLILDGQADLRFWCGQEQGCDLKLNQSLRRALDELRAAHGSAPSGWKWGEAHA-ALAEHVPFHKTPLRALFDLKNNKGGDNFSVNVGRFDYSDPANPFNTRIAATLRMV-IDLADFDNSRYA-LSTRNSGLPFDGATDLNELWARGAYIRI---ADDAPDATDRQLVLRPSASSSGEPRP |
| 1FM2 Chain:B ((170-689)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNSWAVAPGKTANGNALLLQNPHLSWTTDYFTYYEAHLVTPDFEIYGATQIGLPVIRFAFNQR-MGITNTVNGMVGATNYRLTLQ----DGGYLYDGQVRPFERRQASYRLRQADGSTVDKPLEIRSSVHGPVFE-----------RADGTAVAVRVAGLDRPG---MLEQYFDMITAHSFDDYEAA--MARMQVPTFNIVYADREGTINYSFNGVAPKRAEGDIAFWQGNVPGDSSRYLWTETHPLDDLPRVTNPPGGFVQNSNDPPWTPTWPVTYCPANHPSYLAPQTPHSLRAQQSVRLMSENDDLTLERFMALQFSHRAVMADRTLPDLIPAALIDPDPEVQAAARLLAAWDRDFTSDSRAALLFEEWARLFAGQNFAGQ---AAFATPWSLDKPVSTPYGVRD---------------PKAAVDQLRTAIANTKRKYG--AIDRPFGDASRMILNDVNVPGAAGYGNLGSF-----------RVFTWSDPDENGIRTPVHGETW-VAMIEFSTPVRAYGLMSYGNSRQPGTTHYSDQIERVSRADFRELLLRREQVEAAVQERTPFNF---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FM2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26241 for 3629 contacts (7.2/contact) +
2D Compatibility (PS) -49252 + (NN) -3239 + (LL) 18600
1D Compatibility (HY) 20800 + (ID) 2800
Total energy: 10350.0 ( 2.85 by residue)
QMean score : -0.010
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