Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEPNLRGNGKVALVTGAARGIGLGISAWLIAEGWQVVLADNDRERGARVAEAL---GEHAWFVAMDVAQEGQVAMSVAEVLGQFGRLDGLVCNAAIANPRNTPLEALSLGEWTRTLAVNLTGPMLLAKYCTPYLR--AHNGAIVNIASTRAHQSEPDSEAYAASKGGLLALTHALAASLGP-DIRVNALSPGWIDT-------REAAEREAAPL---TELDHDQHLVGRVGTVEDVASLVAWLLSEDAGFVTGQEFLVDGGMTRKMIYLD |
1GEG Chain:D ((3-253)) | ----------KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVA--PSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GEG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150152 for 2056 contacts (-73.0/contact) +
2D Compatibility (PS) -25377 + (NN) -10736 + (LL) 748
1D Compatibility (HY) -14800 + (ID) 4150
Total energy: -204467.0 ( -99.45 by residue)
QMean score : 0.554
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