Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKGDKKVIQHLNKILGNELIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLPNLQDLGKLLIGENTQEMLQCDLNLELKATKDLREAIVHCEQVHDYVSRDLLKDILESEEEHIDYLETQLGLIQKVGLENYLQSHMHEDD
3IS7 Chain:P ((3-156))
--GDKKVIQHLNKILGNELIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLPNLQDLGKLLIGENTQEMLQCDLNLELKATKDLREAIVHCEQVHDYVSRDLLKDILESEEEHIDYLETQLGLIQKVGLENYLQSHMHE--
General information:
TITO was launched using:
RESULT:
Template:
3IS7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36776 for 1161 contacts (-31.7/contact) +
2D Compatibility (PS) -16982 + (NN) -11919 + (LL) 120
1D Compatibility (HY) -23600 + (ID) 7700
Total energy: -96857.0 ( -83.43 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_3IS7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IS7-query.scw
PDB file :
Tito_Scwrl_3IS7.pdb
: