Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRPQRISVLGATGSIGLSTLDVVQRHPDRYEAFALTGFSRLAELEALCLRHRPVYAVVPEQAAAIALQGSLAAAGIRTRVLFGEQALCEVASAPEVDMVMAAIVGAAGLPSTLAAVEAGKRVLLANKEALVMSGALFMQAVKRSGAVLLPIDSEHNAIFQSLPRNYADGLERVGVRRILLTASGGPFRETPLEQLASVTPEQACAHPNWSMGRKISVDSASMMNKGLELIEACWLFDAQPSQVEVVIHPQSVIHSMVDYVDGSVIAQLGNPDMRTPISYAMAWPERIDSGVSPLDMFAVGRLDFQRPDEQRFPCLRLASQAAETGGSAPAMLNAANEVAVAAFLERHIRFSDIAVIIEDVLNREAVTAVE--SLDQVLAADRRARSVAGQWLTRHAG |
3ZI0 Chain:A ((22-387)) | -----RVVVLGSTGSIGTQALQVIADNPDRFEVVGLAAGG--AHLDTL-LRQRAQTGVT-----NIAV-----------IPYHGSDAATRLVEQTEADVVLNALVGALGLRPTLAALKTGARLALANKESLVAGGSLVLRA-ARPGQIV-PVDSEHSALAQCLRGGTPDE-----VAKLVLTASGGPFRGWSAADLEHVTPEQAG--------PMNTLNSASLVNKGLEVIETHLLFGIPYDRIDVVVHPQSIIHSMVTFIDGSTIAQASPPDMKLPISLALGWPRRVSGAAAACDFHTASSWEFEPLDTDVFPAVELARQAGVAGGCMTAVYNAANEEAAAAFLAGRIGFPAIVGIIADVLHAADQWAVEPATVDDVLDAQRWAR------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZI0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237976 for 3035 contacts (-78.4/contact) +
2D Compatibility (PS) -36986 + (NN) -18150 + (LL) 3332
1D Compatibility (HY) -26000 + (ID) 7950
Total energy: -323730.0 ( -106.67 by residue)
QMean score : 0.425
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