Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNPQEHAVCLEMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPSADPLRQLARYIVERRN
3LSN Chain:A ((4-293))
--TAYQASSQARVDAAMHTLFTAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGKPEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALLDPALSDASAEIRLRMVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALEYMHRHKTGALIEASVILGALASGRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATL------------PTYPALLGLAAAKEYALELRDQALHALRPFDAAAEPLRELARYIVE---
General information:
TITO was launched using:
RESULT:
Template:
3LSN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144741 for 2406 contacts (-60.2/contact) +
2D Compatibility (PS) -31352 + (NN) -30985 + (LL) 704
1D Compatibility (HY) -30400 + (ID) 10850
Total energy: -247624.0 ( -102.92 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_3LSN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LSN-query.scw
PDB file :
Tito_Scwrl_3LSN.pdb
: