Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEQTPEQPSTAPNPALQRQRASQLAQALRTELQKALIGQGAVIDDVLTAL---------------LAGGHVLVEGVPGLGKTLLVRALARCFDGGFARIQFTPDLMPSDVTGHAVYDLASEQFKLRKGPVFTHLLLADEINRA-----------PAKTQAALLEVMQERQVTLEGRALPVPQPFMVLATQNPIEQEGTYPLPEAELD--RFMLKLRIDYPAEAEEQTLVRQVTRSARSDMLDVANLRPLLKDKDVLALQRIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRCGRARALLRGGEFVVPDDIKGCALAVLRHRVRLSPELDIEGLSVDQVLQQLLDQVPAPRV |
| 3H4M Chain:A ((15-263)) | --------------------------------RYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKK--FIGEGASLV--KDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDG------FDARGDVKIIGATNRPD-----ILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKM---------------------------NL-AEDVNLEEIAKMT----------EGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKK----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H4M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102447 for 1740 contacts (-58.9/contact) +
2D Compatibility (PS) -23877 + (NN) -12005 + (LL) 7516
1D Compatibility (HY) -3600 + (ID) 2000
Total energy: -136413.0 ( -78.40 by residue)
QMean score : 0.382
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