Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLCLDSLLNGTQDPKAFGRVAVLFGGKSAEREVSLKSGAMVLQSLLAAGVDAFGIDVGEDLLQRLVEEKIDRAFIILHGRGGEDGSMQGLLECAGIPYTGSGVLASALAMDKLRTKRVWLSLGLPTPDYAVLASEDDCR-EAAQRLGFPLIVKPAHEGSSIGMAKVGGLDELIAAWREAARYDSQVLVEQWISGPEFTVATLRGQVLPAIRLGTPHTFYDYDAKYLASDTRYQVPCGLDEAKERELKELTARACDALGIQGWGRADVMQDAEGRFWLLEVNTAPGMTDHSLVPMAARAAGLDFQQLVLAILADSREARG |
| 3R5X Chain:A ((2-303)) | ----------------NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLIEKAKDIDFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWIELTKMEDLNFDELDKLGFPLVVKPNS----VGVKIVYDKDELISMLETVFEWDSEVVIEKYIKGEEITCSIFDGKQLPIISIRHAAEFFDYNAKYDDA-STIEEVIELPAELKERVNKASLACYKALKCSVYARVDMMVKD-GIPYVMEVNTLPGMTQASLLPKSADAAGIHYSKLLDMIIETSLRVRK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3R5X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -162755 for 2388 contacts (-68.2/contact) +
2D Compatibility (PS) -33169 + (NN) -13932 + (LL) 456
1D Compatibility (HY) -24400 + (ID) 5100
Total energy: -238900.0 ( -100.04 by residue)
QMean score : 0.495
|
|
|