Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRKLAAVSLLSLLSAPLLAAECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCTFPGHSALMKGTLTLK
1ILU Chain:L ((1-128))
--------------------AECSVDIQGNDQMQFNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMSFCTFPGHSALMKGTLTLK
General information:
TITO was launched using:
RESULT:
Template:
1ILU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63048 for 973 contacts (-64.8/contact) +
2D Compatibility (PS) -13515 + (NN) -2965 + (LL) 2324
1D Compatibility (HY) -16000 + (ID) 6350
Total energy: -99554.0 ( -102.32 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_1ILU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ILU-query.scw
PDB file :
Tito_Scwrl_1ILU.pdb
: