Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIDVAIADDQLDRVIEAITKAANTGKIGDGKIFVVNLEQAIRIRTGETDTDAI
3TA1 Chain:C ((1-108))
MKMVVAVIRPEKLECVKKALEERGFVGMTVTEVKGRGEQKGI---------EVDLLQKTKVEVVVSDDAVDEVVEAIVSSARTGKFGDGRIFVIPVEKSVKIRTGDEE----
General information:
TITO was launched using:
RESULT:
Template:
3TA1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55777 for 643 contacts (-86.7/contact) +
2D Compatibility (PS) -10840 + (NN) -1104 + (LL) 1016
1D Compatibility (HY) -10000 + (ID) 2600
Total energy: -79305.0 ( -123.34 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_3TA1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TA1-query.scw
PDB file :
Tito_Scwrl_3TA1.pdb
: