Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQNETASHGINFDALGRDRQSLDLASESVELEVPGLNLFYGAKQALFDVRMNIPKQRVTAFIGPSGCGKSTLLRCFNRMNDLVDGCRVEGEIRLDGHNIFAKGVDVAELRRRVGMVFQKPNPFPKSIYENVVYGLRIQGINKKRVLDEAVEWALKGAALWEEVKDRLHESALGLSGGQQQRLVIARTIAVEPEVLLLDEPCSALDPISTLKIEELIYELKSKFTIVIVTHNMQQAARVSDYTAFMYMGKLIEFGDTDTLFTNPAKKQTEDYITGRYG |
3NH9 Chain:A ((63-277)) | --------------------------------------YADGRETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGC-----IRIDGQDI--SQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRLSTVVN-ADQILVIKDGCIVERGRHEALLS---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NH9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100026 for 1649 contacts (-60.7/contact) +
2D Compatibility (PS) -22480 + (NN) -155 + (LL) 3376
1D Compatibility (HY) -9200 + (ID) 3500
Total energy: -131985.0 ( -80.04 by residue)
QMean score : 0.411
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