Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKKTFFVSLALALSLNAGNIQIQNMPKVKERISVPSKEDTIYSYHDSIKDSIKAVVNISTEKKIKNNFIGGGVFNDPFFQQFFGDLGGMIPKERMERALGSGVII-SKDGYIVTNNHVIDGADKIKVTIPGSNKEYSATLVGTDSESDLAVIRITKDNLPTIKFSDSNDILVGDLVFAIGNPFGVGESVTQGIVSALNKSGIGINSYENFIQTDASINPGNSGGALIDSRGGLVGINTAIISKTGGNHGIGFAIPSNMVKDIVTQLIKTGKIERGYLGVGLQDLSGDLQNSY---DNKEGAVVISVEKDSPAKKAGILVWDLITEVNGKKVKNTNELRNLIGSMLPNQRVTLKVIRDKKERTFTLTLAERKNPNKKETISAQNGVQGQLNGLQVEDLTQKTKRSMRLSDDVQGVLVSQVNENSPAEQAGFRQGNIITKIEEVEVKSVADFNHALEKYKGKPKRFLVLDLNQGYRIILVK
3PV2 Chain:A ((6-439))-------------------------MP----------------SMAPVLKNIMPAIVNVAVQGYLPN---------------------------RKFESIGSGVIIDPNNGVIITNDHVIRNASLITVTLQ-DGRRLKARLIGGDSETDLAVLKIDAKNLKSLVIGDSDKLEVGDFVVAIGNPFGLSQSATFGIVSAL----------KNFIQTDAAINPGNSGGALVNAKGELIGINTAILV------GIGFAIPINMVKDVAQQIIKFGSIHRGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPLTLSAVV-----TDIKSHEQKLQSNNPFLYGLALRAFEQESPPH----GNVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQEKKKELLVQVLRGPGSMYLLVI--


General information:
TITO was launched using:
RESULT:

Template: 3PV2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -150515 for 3084 contacts (-48.8/contact) +
2D Compatibility (PS) -40489 + (NN) -5206 + (LL) 4704
1D Compatibility (HY) -31600 + (ID) 7550
Total energy: -230656.0 ( -74.79 by residue)
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_3PV2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PV2-query.scw
PDB file : Tito_Scwrl_3PV2.pdb: