Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNLNWAILGPGSIAHE-FAEGMRGMNR--EIYAVGARSLEKGQAFAS-QYGIENVYDDFDKMLADPAIDVVYIATPHSNHYEFIMKSLHNGKHVLAEKAITVSSKELNEINVLAKEKGLIVKEAMTIFHMPLYKKLREIVESGAIGKLKI-IQVAFGS-AKEKDPKNRFYNMD--LAGGALLDIGTYALSF-ARYFLSETPDEVLTTMKKF-ETGVD-EQSGILLKNNEEELAVVSLSFRAKMPKRGVIACEEGFITVDEYPRASRATVTHTATG-KVEEIEVGETSKALEYEITAMEESVATGEN---MTYQLTNDVIAIMSDVRTQWGIKFPFEK-- |
| 1ZH8 Chain:A ((16-340)) | LRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNP-AVFDSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRHVPAFWKAKELVESGAIGDPVFMNWQIWVGMDENNKYVHTDWRKKPKHVGGFLSDGGVHHAAAMRLIL--GEIEWISAVAKDLSPLLGGMDFLSSIFEFENGTVGNYTISYSLKGNERFEITGTKGKISISW------DKIVLNEEEMKVPQ------ENSYQKEFEDFYQVVAEGKPNDLGSPVQALKDLAFIEACVRSAGNKVFVSSLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172273 for 2542 contacts (-67.8/contact) +
2D Compatibility (PS) -32977 + (NN) -9068 + (LL) 1004
1D Compatibility (HY) -7200 + (ID) 3150
Total energy: -223664.0 ( -87.99 by residue)
QMean score : 0.512
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