Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------------MEIWDAYDQYGFITGLTLNRDQNIPQGLFHLVVDVILFHEDGDVLMMKRHPKKKAFPAYFEATAGGSALKGENAKQAILRELKEETGIVPQCLTFLNREWFSERSYFVDHFIAKYNGAKDIITLQEGETVDYIWLKPEYIDLFLSK-NKLIPSQIKLLKSLI
3E57 Chain:A ((4-195))
ERILVVKTEDFLKEFGEFEGFMRVNFEDFLNFLDQYGFFRERDEAEYDETTKQVIPYVVIMDGDRVLITKR----YSLGIGGHVREGDGATPREAFLKGLEREVNEEVDVSLRELEFLGLINSSTTEVSRVHLGALFLGRGKFFSVKEKDLFEWELIKLEELEKFSGVMEGWSKISAAVLLNLF
General information:
TITO was launched using:
RESULT:
Template:
3E57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57983 for 1145 contacts (-50.6/contact) +
2D Compatibility (PS) -16766 + (NN) -3116 + (LL) 32
1D Compatibility (HY) -4000 + (ID) 1400
Total energy: -83233.0 ( -72.69 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_3E57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E57-query.scw
PDB file :
Tito_Scwrl_3E57.pdb
: