Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFNLEQVKVFENYEIENWEEGQVTLTTKVVDSSLNYYGNAHGGYLFTLCDQVSGLVAISTGYEAVTLQSNINYLRAGRLDDLLTVIGTCVHNGRTTKVVDVHIKNQKGEMVTTAIFTMFVTGERKEK
3LBE Chain:A ((41-160))
-----HEIRVFENFDMVSFEKGHVIVTTEVVDKSLNYYGFAHGGYIFTLCDQISGLVSISTGFDAVTLQSSINYLKSGKLGDTLLIDGRCVHDGRTTKVVDVTVTNQLKQEVAKATFTMFVTGKR---
General information:
TITO was launched using:
RESULT:
Template:
3LBE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71911 for 914 contacts (-78.7/contact) +
2D Compatibility (PS) -12848 + (NN) -795 + (LL) 732
1D Compatibility (HY) -15200 + (ID) 3800
Total energy: -103822.0 ( -113.59 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_3LBE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LBE-query.scw
PDB file :
Tito_Scwrl_3LBE.pdb
: