Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQDYISYIRSKVGHETIFLTYSGGILTDG-KGRVLLQLRADK---NSWGIIGGCMELGESSVDTLKREFFEETGLRVEPIRLLNVYTNFQDSYPNGDKAQTVGFIYEVSCPKPVNIEGFHNEETLQLDYFSKEDVKNITIVN-EQHQLILDEYFSQTFQMGR
3EXQ Chain:A ((5-139))
--------------RTQPVELVTMVMVTDPETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTFCGTCEWFDDD----RQHRKLGLLYRASNFTG-TLKA---SAEGQLSWLPITALTR--ENSAASLPEFLQVFTGTASTLVS
General information:
TITO was launched using:
RESULT:
Template:
3EXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34473 for 893 contacts (-38.6/contact) +
2D Compatibility (PS) -13681 + (NN) -1418 + (LL) 1280
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -55242.0 ( -61.86 by residue)
QMean score : 0.378
(partial model without unconserved sides chains):
PDB file :
Tito_3EXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EXQ-query.scw
PDB file :
Tito_Scwrl_3EXQ.pdb
: