Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL
1MH1 Chain:A ((3-183))
PQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPPP----------
General information:
TITO was launched using:
RESULT:
Template:
1MH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139017 for 1482 contacts (-93.8/contact) +
2D Compatibility (PS) -19686 + (NN) -12015 + (LL) 760
1D Compatibility (HY) -23200 + (ID) 6400
Total energy: -199558.0 ( -134.65 by residue)
QMean score : 0.732
(partial model without unconserved sides chains):
PDB file :
Tito_1MH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MH1-query.scw
PDB file :
Tito_Scwrl_1MH1.pdb
: