Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESPVRLSLLYVVLASLLLPGRSVFINRERANNVLQRIRRANSFFEEIKKGNLERECVEEICSFEEAREVFEDNEKTTEFWNKYEDGDQCESSPCQNQGECRDGLGSYTCTCTEGFEGKNCELFVRKLCSLDNGDCDQFCREEQNSVVCSCAKGYFLGNDGKSCLSTAPFPCGKTNKGRAKRSVALNTSNSEPDPEDLMPDADILYPTESPSELLNLNKTEPEANSDDVIRIVGGQECKRGECPWQALLFSDEETDGFCGGTILNEFYILTAAHCLHQ--------AKRFKVRVGDLNTEQED-GGEMVHEVDMIIKHNKFQ-RDTYDFDIAMLRLKTPITFRENVAPACLPQKDWAEATLMTQKTGIVSGFGRTHEKGR-QSKVLKMMEVPYVDRNTCRLSTSFSITQNMFCAGYDA---KQEDACQGDSGGPHVTRF--KDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMKARVGPTSETPRLTHPPY |
3RM2 Chain:H ((1-257)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKET--GQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQF--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RM2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146643 for 2006 contacts (-73.1/contact) +
2D Compatibility (PS) -25615 + (NN) -5036 + (LL) 11428
1D Compatibility (HY) -20800 + (ID) 4650
Total energy: -191316.0 ( -95.37 by residue)
QMean score : 0.266
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