Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIAD---GSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEE--VIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQR----GVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGLNRN--VRYLTLDIFAGPPNYPFSDEY |
| 3KRB Chain:A ((21-324)) | -----------SMQYPPRLGFGTWQA---PPEAVQTAVETALMTGYRHIDCAYVYQNEEAIGRAFGKIFKDASSG-IKREDVWITSKLWNYNHRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAK--IKPLVNQIEIHPWHPNDATVKFCLDNGIGVTAYSPMGGSYA----TQ-KNVILECKTLKAIADAKGTSPHCVALAWHVKKWNTSMYSVIPKSQTPARIEANFKCTEVQLSDDDMDAINNIHLNKRIRFCDP--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175213 for 2430 contacts (-72.1/contact) +
2D Compatibility (PS) -31832 + (NN) -22317 + (LL) 1720
1D Compatibility (HY) -28000 + (ID) 5450
Total energy: -261092.0 ( -107.45 by residue)
QMean score : 0.641
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