Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASHLVLYTGAKMPILGLGTWKSPPGKVTEAVKVAIDLGYRHIDCAHVYQNENEVGLGLQEKLQGQVVKREDLFIVSKLWCTDHEKNLVKGACQTTLRDLKLDYLDLYLIHWPTGFKPGKDPFPLDGDGNVVPDESDFVETWEAMEELVDEGLVKAIGVSNFNHLQVEKILNKPGLKYKPAVNQIEVHPYLTQEKLIEYCKSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKYNKTTAQVLIRFPMQRNLIVIPKSVTPERIAENFQVFDFELSPEDMNTLLSYNRNWRVCALMSCASHKD-YPFHEEY |
3H7U Chain:A ((26-325)) | --TFFKLNTGAKFPSVGLGTWQASPGLVGDAVAAAVKIGYRHIDCAQIYGNEKEIGAVLKKLFEDRVVKREDLFITSKLWCTDHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGS--VGIKP-ENL--LPVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELAR--VPPAVNQVECHPSWRQTKLQEFCKSKGVHLSAYSPLGSPGTTWLK---SDVLKNPILNMVAEKLGKSPAQVALRWGLQMGHSVLPKSTNEGRIKENFNVFDWSIPDYMFAKFAEIEQA-RLVTGSFL-VHETLSPYK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176953 for 2533 contacts (-69.9/contact) +
2D Compatibility (PS) -32301 + (NN) -17848 + (LL) 840
1D Compatibility (HY) -27200 + (ID) 6800
Total energy: -260262.0 ( -102.75 by residue)
QMean score : 0.684
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