Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQSKGKKRNPGLKIPKEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIME-LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD--TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFVKLILGD
3GGF Chain:A ((18-289))----------------------------------------------IADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITV-LSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQ------IATMLKEILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVA--------RNTFVGTPFWMAPEVI----QQSAYDSKADIWSLGITAIELAKGE-PPNSDMHPMRVLFLIPKNNPPTLVGD-FTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTELIDRFKRW


General information:
TITO was launched using:
RESULT:

Template: 3GGF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126608 for 2022 contacts (-62.6/contact) +
2D Compatibility (PS) -27588 + (NN) -8637 + (LL) 2652
1D Compatibility (HY) -16800 + (ID) 4250
Total energy: -181231.0 ( -89.63 by residue)
QMean score : 0.334

(partial model without unconserved sides chains):
PDB file : Tito_3GGF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GGF-query.scw
PDB file : Tito_Scwrl_3GGF.pdb: