Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKKVFCGVVTKAKCDKTVKVSVLRVYKDKLYKKVIKRYKEYTVHDEN-NSCKEGDKVFIQEHRPISATKKWVIVRVE
3J7A Chain:V ((70-146))
-RGRILKGMVISNKMKRTIIIRRNYLHYVKKYNRFEKRHKNIPCHCSPCFDVKEGDIVTVGQCRPLSKTVRFNVLHVE
General information:
TITO was launched using:
RESULT:
Template:
3J7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24339 for 484 contacts (-50.3/contact) +
2D Compatibility (PS) -8263 + (NN) 337 + (LL) 208
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -37507.0 ( -77.49 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_3J7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7A-query.scw
PDB file :
Tito_Scwrl_3J7A.pdb
: