Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTK-LPQNFMWGGALAANQFEGGYEKGGKGLSVIDVMTSGAHGKARQITESIDLNHYYPNHEGIDFYHRYKEDIALFKEMGLKCLRTSIAWTRIFPNGDEDVPNEEGLAFYDRIFDELIAQGIEPVVTLSHFEMPLHLAKHYGGFRNREVVDYFVHFARVVFERYKDKVTYWMTFNEINNQMDTSNPIFLWTNSGVALTENDNPEEVLYQVA-----HHELLAS-ALAVRLGKEINPKFKIGTMISHVPIYPYSC-HPKDMMEAQIANRLR-FFFPDVQVRGYYPSYAKK----MLARKGYDVGWQEGDDSILQQGT--VDYIGFSYYMSTAVK-HDVDTTVENNIVNG------------GLNHSVENPHIATSDWGWAIDPDGLRYTLNVLYDRYQ--LPLFIVENGFGAVDEVVDGHIHDDYRIEYLKAHITAAIEAVDQDGVDLIGYTPWGIIDIVSFTTGEMKKRYGLIYVDRDNDGHGTMERLKKDSFYWYQQVIASNGDKL |
| 4PBG Chain:B ((1-465)) | MTKTLPKDFIFGGATAAYQAEGATHTDGKGPVAWD--------------KYLEDNYWYTAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTGYGEV-NEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEI-------GPI----GDGQYLV-GKFPPGIKYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAKDLNDFLGINYYMSDWMQAFDGETEI---IHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITCNGLGYKDEFVDNTVYDDGRIDYVKQHLEVLSDAI-ADGANVKGYFIWSLMDVFSWSNG-YEKRYGLFYVDFD-----TQERYPKKSAHWYKKLAETQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238581 for 3741 contacts (-63.8/contact) +
2D Compatibility (PS) -46283 + (NN) -15751 + (LL) 1212
1D Compatibility (HY) -29600 + (ID) 8350
Total energy: -337353.0 ( -90.18 by residue)
QMean score : 0.534
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