Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK |
| 1SSG Chain:B ((3-243)) | -RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDF----ARQKLDAKIGVAAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQT-KAIADNVKDWSK-VVLAYEPVWAIGTGYSLTPQQAQEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPE-FVDII---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SSG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83139 for 2063 contacts (-40.3/contact) +
2D Compatibility (PS) -26046 + (NN) -11790 + (LL) 732
1D Compatibility (HY) -15200 + (ID) 5300
Total energy: -140743.0 ( -68.22 by residue)
QMean score : 0.583
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