Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHLFEGVGVALTTPF-TNNKVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKERILKTVIDLVDKRVPVIAGTGTNDTEKSIQASFQAKALGADAIMLITPYYNKTNQRGLVKHFEAITDAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRIDTNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQ-----QSGLDIQDQFKPIGTLLSALSVDINPIPIKALTSYLEF-GNYELRLPLVSLEDTDTKVLREAYDTFKAGENE |
| 4PFM Chain:A ((1-276)) | --HMINGSIVALITPLNSDGTVDYTSLEKLVEYHITEGTDAIVAVGTTGESATLPISEHIAVVGQTVKFASGRIPVIGGNGANATAEAIELTKAQNKLGVAAMLGVTPYYNKPSPKGLIAHYTAVAASTDIPQILYNVPGRTAVDMLPETIAQLVEVPNIIGV-DATGDVARVKQLRD-LCGNDFLLYSGDDATAREFLTLGGDGVISVANNIVPKLFKLMCDAALAGDTQAAMAAEDQIK---GLFSALFCEANPIPVKWAAHKMGLISQGDIRLPLTELS-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -158547 for 2381 contacts (-66.6/contact) +
2D Compatibility (PS) -28722 + (NN) -11015 + (LL) 1412
1D Compatibility (HY) -21600 + (ID) 4950
Total energy: -223422.0 ( -93.84 by residue)
QMean score : 0.541
|
|
|