Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIPHKERIIPYLDYVDEQAINAGAVNTVLIK-DGKWIGYNTDGIGYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRTMARFESWNLNINQ---ISLADA-EKYLAEFDIVINTTPAGMAGNNESIINLKHLSPNTLMSDIVYIP-YKTPILEEAERKGNH-IYNGLDMFVYQGAESFKIWTNKDADINSMKTAVLQQLKGE |
| 1P77 Chain:A ((2-271)) | DLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNITSPFKERAYQLADEYSQRAKLAEACNTLKKLDDGKLYADNTDGIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSA--------SVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDGFGMLVAQAAHSFHLWRGVMPDFVSVYEQLKKAM--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137633 for 2267 contacts (-60.7/contact) +
2D Compatibility (PS) -26903 + (NN) -4682 + (LL) -16
1D Compatibility (HY) -9600 + (ID) 3850
Total energy: -182684.0 ( -80.58 by residue)
QMean score : 0.474
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