Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMINKLIVPVTASALLLGACGASATDSKENTLISSKAGDVTVADTMKKIGKDQIANASFTEMLNKILADKYKNKVNDKKIDEQIEKMQKQYGGKDKFEKALQQQGLTADKYKENLRTAAYHKELLSDKIKISDSEIKEDSKKASHILIKV------KSKKSDKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHIIKADKPTDFNSEKQSLKEKLVDQKVQKNPKLLTDAYKDLLKEYDVDFKDRDIKSVVEDKILNPEKLKQGGAQGGQSGMSQ |
1PIN Chain:A ((6-163)) | --------------------------------------------------------------------------------------------KLPPGWEKRMSRS--SGRVYYFNHITNASQWERPSGG---KNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFS-DCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 53583 for 1081 contacts (49.6/contact) +
2D Compatibility (PS) -15808 + (NN) -4159 + (LL) 11292
1D Compatibility (HY) -3200 + (ID) 2100
Total energy: 39608.0 ( 36.64 by residue)
QMean score : 0.297
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