Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKTLPEDFIFGGATAAYQAEGATNTDGKGRVAWDTYLEENYWYTAEP-----ASDFYNRYPVDLELSEKFGVNGIRISIAWSRIFPNGY--GEVNPKGVEYYHKLFAECHKRHVEPFVTLHHFDTPEVLH-KDGDFLNRKTIDYFVDYAEYCFKEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPGIKYDFEK-----------VFQSHHNMMVAHARAVKLFKDGGYQ----GEIGVVHALPTKYPFDPSNPEDVRAAELEDIIHNKFILDATYLGKYSRETMEGVQHILSVNGGKL-NITDEDYAILDAAKDLNDFLGINYYMSDWMRGYDGESEITHNATGDKGGSKYQLKGVGQREFDVDVPRTDWDWM-IYPQGLYDQIMRVVKDYPNYHKIYITENGLG-YKDEFIESEKTVHDDARIDYVRQHLNVIADAIKDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF-ETQERYPKKSAYWYKELAETKEIK |
| 3PTM Chain:A ((32-502)) | --RSFPKGFIFGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPEKIADRSNGDVASDSYHLYKEDVRLMKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSPQALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGRCSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYK-AKYQALQKGKIGITLVSHWFVPFSRSKSNNDAAKRAIDFMFGWF-MDPLIRGDYPL-SMRGLV------GNRLPQFTKEQSKLVKGAFD---FIGLNYYTANYADNLPPSNGLNNSYTTD---SRANLTGV--RNGIPIGPQAASPWLYVYPQGFRDLLLYVKENYGN-PTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIRDGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138076 for 3943 contacts (-35.0/contact) +
2D Compatibility (PS) -46577 + (NN) -13955 + (LL) 1516
1D Compatibility (HY) -32400 + (ID) 8800
Total energy: -238292.0 ( -60.43 by residue)
QMean score : 0.638
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