Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNDFNLLILSGPSGAGKSTLTKYLQEKIPKT-HFSLSTTTRKPREGEVDGLHYNFVSEEEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFDIDVQGHEILKKHY--PNACSVFISTKNQEILKERLLLRGTDSKETIEKRLINAYKEMQCL--ESFDYLIINEDLEKSKEIILSIAKTLVHRLKAFNFEKICKAWKNESL
1Z6G Chain:A ((22-209))
---NIYPLVICGPSGVGKGTLIKKLLNEFPNYFYFSVSCTTRKKREKEKEGVDYYFIDKTIFEDKLKNEDFLEYDNYANNFYGTLKSEYDKAKEQNKICLFEMNINGVKQLKKSTHIKNALYIFIKPPSTDVLLSRLLTRNTENQEQIQKRMEQLNIELHEANLLNFNLSIINDDLTLTYQQLKNYLLNSYIHL-----------------
General information:
TITO was launched using:
RESULT:
Template:
1Z6G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56996 for 1333 contacts (-42.8/contact) +
2D Compatibility (PS) -20506 + (NN) -12110 + (LL) 1536
1D Compatibility (HY) -12400 + (ID) 3200
Total energy: -103676.0 ( -77.78 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_1Z6G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z6G-query.scw
PDB file :
Tito_Scwrl_1Z6G.pdb
: