Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKMNAPDGVAVWVNEDRCKGCDICVSVCPAGVLGMGIEKERVLGKVAKVAYPESCIGCV------QCELHCPDFAIYVADRKDFKFAKVSKEAQERSEKVKANKYMLLEETILEGRGK
2FGO Chain:A ((2-64))
------------LKITDDCINCDVCEPECPNGAISQGEEI--------YVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDDANVESKDQLMEKYRKITGK-------------------
General information:
TITO was launched using:
RESULT:
Template:
2FGO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31398 for 364 contacts (-86.3/contact) +
2D Compatibility (PS) -5653 + (NN) -771 + (LL) 3284
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -37188.0 ( -102.16 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_2FGO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FGO-query.scw
PDB file :
Tito_Scwrl_2FGO.pdb
: