Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------MIFIDACFRKETPYTPIWMMRQAGRYLSEYQESRKKAGSFLELCKNSDLATEVTLQPVEILGVDAAILFSDILVVPLEMGLNLEFIPKKGPHFLETITDLKSVESL--KVGVYKQLNYVYDTISQTRQKLSKEKALIGFCGSPWTLATYMIEGEGSKSYAKSKKMLYSEPEVLKALLEKLSLELIEYLSLQIQAGVNAVMIFDSWASALEKEAYLEFSWDYLKKISKELKKRYA-----HIPVILFPKGIGAYLDSI-DGEFDVFGVDWGTPLTAAKKILGGKYVLQGNLEPTRLY-DKNALEEGVEKILKVMGNQGHIFNLGHGMLPDLPRENAKYLVQLVHAKTRR--- |
1URO Chain:A ((10-366)) | GFPELKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAA-QDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHSRLLRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1URO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258557 for 3021 contacts (-85.6/contact) +
2D Compatibility (PS) -36846 + (NN) -19359 + (LL) 144
1D Compatibility (HY) -31200 + (ID) 6550
Total energy: -352368.0 ( -116.64 by residue)
QMean score : 0.571
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