Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVIIAANNLCLQYQQNEPVIKHANLRIKRKDFVFISGPSGSGKSTLLRSFYGDLKVFSGKLEVCNINMN----------NASKSTILDLRKNIGVVFQDYKLIQDYTIEQNI-KLPMVICGIKKEECHLQLEKLLGHIDLRHKAN-RYPKELSGGEQQRVAMARAMANCPELILADEPTGNLDDYSSDKIWSLLRGMNTQLNATIVVVTHK--FPKNFSAYHRKFYIEEGEVYEYS
1B0U Chain:A ((21-233))
-------------------VLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGIDERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEE-GKTMVVVTHEMGFARHVSSH--VIFLHQGKIEEEG
General information:
TITO was launched using:
RESULT:
Template:
1B0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109970 for 1534 contacts (-71.7/contact) +
2D Compatibility (PS) -21541 + (NN) -7869 + (LL) 1972
1D Compatibility (HY) -15200 + (ID) 3400
Total energy: -156008.0 ( -101.70 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_1B0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B0U-query.scw
PDB file :
Tito_Scwrl_1B0U.pdb
: