Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKIQKIHPNALIPKYQTEGSSGFDLHAVEEVVIKPHSVGLVRIGICLSLEVGYELQVRTRSGLALNHQVMVLNSPGTVDNDYRGEIKVILANLSD-KDFKVQVGDRIAQGVVQKTYKAEFIECEQLDETSRGSGGFGSTGVSKA
1SIX Chain:A ((25-157))
--LAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGG----
General information:
TITO was launched using:
RESULT:
Template:
1SIX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69145 for 887 contacts (-78.0/contact) +
2D Compatibility (PS) -13712 + (NN) -316 + (LL) -112
1D Compatibility (HY) -8800 + (ID) 2550
Total energy: -94635.0 ( -106.69 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_1SIX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIX-query.scw
PDB file :
Tito_Scwrl_1SIX.pdb
: