Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTESKFPKDFLWGGAVAANQCEGAYLEDGKGLSLVDILPTVEDGRWEALFNPSKALATDYGFYPSHESIDFYHRYKEDIKLMAEMGFKCFRMSISWPRIFPNGDETTPNEKGLAFYDAVFDECHKYGIEPVVTINHFDTPLEVFKKYGGWKNRKCIDFYLNFCEAIFTRYKDKVKYWMTFNEINMILHLPYIGGGLDVTKEDNPEEVKY------QAAHHQLVASALATKLGHEINPENQIGCMLAAGNTYPMTC-NPKDVWKS-IEADREGYFFIDVQARGYYPSYT----KRFFKEHNINIKMEDGD---LDALRDHTVDYVAFSYYSSRLTSA-------------DPEKNKETEGNVFATLKNPYLKASEWGWQIDPLGLRITMNTIYDRYQ--KPLFIVENGLGAVDTVEEDGSITDDYRIDYMREHVREMGEAIEDGVELLGYTPWGCIDLVSAGSGEMKKRYGFIYVDRDNKGNGTLNRSKKKSFDWYKKVIETNGKDID |
| 3PBG Chain:B ((1-465)) | MTKT-LPKDFIFGGATAAYQAEGATHTDGKGPVAWD--KYLEDNYW----------------YTAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTGYGEV-NEKGVEFYHKLFAECHKRHVEPFVTLHHFDTP-EALHSNGDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKF-------PPGIKYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAKDLN-DFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEF-VDNTVYDDGRIDYVKQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNG-YEKRYGLFYVDFD-----TQERYPKKSAHWYKKLAETQ----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166427 for 3729 contacts (-44.6/contact) +
2D Compatibility (PS) -45858 + (NN) -17136 + (LL) 1492
1D Compatibility (HY) -30000 + (ID) 8550
Total energy: -266479.0 ( -71.46 by residue)
QMean score : 0.523
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