Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKIGNVEIKNQVVVAPMAGI--------SNSAFRLTVK--EFGAGLVCCEMISDKGIAYRNA-----------KTLDML--YIDEKEKPLSLQIFGG-----------------------EK----------------------ETLVEAAKFVAENTTADIIDINMGC---------PVNKIIKCEAGAKWLLDPNKVYDMVAAVVDAV--DKPVTVKMRIGWD----EEHVFAIENALAAERAGAAAVAMHGRTRVQMY----EGSANWDVLRDVKRELKIPFMANGDVRTPEDAKRILEHTGADGVMIGRAALGNPWMIYRTVKFLETGELLLEPEPREKMQTAMLHLNRLVELKGENIAVREFRQHAAYYLKGARGSTRAKVAANQATKQSEMEAILNEFVLQYEEKALAKQD |
| 3HGJ Chain:A ((7-336)) | PLELGGLRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRALR-AGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKALG--------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -147286 for 2007 contacts (-73.4/contact) +
2D Compatibility (PS) -25695 + (NN) -7378 + (LL) 7816
1D Compatibility (HY) -8000 + (ID) 2350
Total energy: -182893.0 ( -91.13 by residue)
QMean score : 0.465
|
|
|