Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEGFAVIGLGRFGGSICRSLVEQGMEVLAIDSDEERVNEYMSIATHAVIANSTDENALRQLGIRNFEHVIVAIGEDIQSSILTTLILKEMGVKYVTAKATNDKHAKLLDKIGADRVVHPERDMGRRIAHYIVSKNMLDYLELSDEYSLVEISVSDPRFLGKSLVDLDFRNSFGVNIVGIKKDKQMIITPEANDVLHEGDILIVIGSDDDIERLQEKIQ
2HMT Chain:A ((6-143))
-NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSDENVLN--------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HMT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107857 for 1073 contacts (-100.5/contact) +
2D Compatibility (PS) -14544 + (NN) -1169 + (LL) 5576
1D Compatibility (HY) -14000 + (ID) 4150
Total energy: -136144.0 ( -126.88 by residue)
QMean score : 0.696
(partial model without unconserved sides chains):
PDB file :
Tito_2HMT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HMT-query.scw
PDB file :
Tito_Scwrl_2HMT.pdb
: