Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEAMNEQDEMLVMSGKEHREVLKRMLSYTKYHIPSLIWTGVLVLLVTLADVFAPILIKIFLDDYLTPMNLEMQALLILGAGYLGLTIGKSVVWYFQLLFFQKIALEIVQQMRIDIFTKLHSLGMRYFDKTPAGSIVSRVTNDTEAVKDMFINVLSTAIQSLFMLVGIYAAMFALNVQLALYSLLLFPLIVFIIFVYRKYSSQFYRARREKLSQLNAKIAESISGMSIVQQFNQERRLVKEFEKINKDYYDVGMKNIKFNALLLGPAIDLIYALAVVIILSFFGAESLIGPVAIGTIYAFISYFDRFLEAIYNVMERLAMYQEAITAASRVFRIMDETEEVPAQLN----DPEAKITRAKIEFKDVSFAYEGG--RDVLKNISFTAEPGQTVALVGHTGSGKSSIINLMMRFYEFE---RGDILIDGKSIKSHEITELRKKTGLVLQDSFMFYGDINTNIRLYDKSITDEQIVDAAKFVQADGFIQTLSDEYNHKVIERGASFSSGQRQLISFARTVVTNPQILVLDEATANIDTETESLIQTGLKRMR--EGRTTIAIAHRLSTIKDADLILVLSKGRIIERGTHDSLIAE--EGVYHSMYQLQNSGMDLDEAL |
3WMG Chain:A ((29-598)) | -----------------------------------IVIGFIASILEGATLPAFAIVFGRMFQVFTKSKSQIEGETWKYSVGFVGIGVFEFIVAGSRTALFGIASERLARDLRVAAFSNLVEQDVTYFDRRKAGELGGKLNNDVQVIQYSFSK-LGAVLFNLAQCVVGIIVAFIFAPALTGVLIALSPLVVLAVVVQMIEMSGNTKRSSEAYASAGSVAAEVFSNIRTTKAFEAERYETQRYGSKLDPLYRLGRRRYISDGLFF-GLSMLVIFCVYALALWWGGQLIARGSLNLGNLLTAFFSAILGFMGVGQAAQVWPDVTRGLGAGGELFAMIDRVPQYRRPDPGAEVVTQPLVLKQGIVFENVHFRYPTRMNVEVLRGISLTIPNGKTVAIVGGSGAGKSTIIQLLMRFYDIEPQGGGLLLFDGTPAWNYDFHALRSQIGLVSQEPVLFSGTIRDNILYGKRDATDEEVIQALREANAYSFVMALPDGLDTEVGERGLALSGGQKQRIAIARAILKHPTLLCLDESTSALDAESEALVQEALDRMMASDGVTSVVIAHRLSTVARADLILVMQDGVVVEQGNHSELMALGPSGFYYQLVEKQLAS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -343554 for 4171 contacts (-82.4/contact) +
2D Compatibility (PS) -59351 + (NN) -18917 + (LL) 3780
1D Compatibility (HY) -34800 + (ID) 7300
Total energy: -460142.0 ( -110.32 by residue)
QMean score : 0.428
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