Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIFVWAQDRAGNIGKDNKMPWHLPGDLQFFKKTTTGKTLVMGRKTYESLGKA-LPNRKTIVLTRDQGLKLDDAEILHSKEAVLALAETGEP-IYIVGGAEIYRLFMDVADQLIVTKIDAEFEADTAFP-EVDWENFSEVAKEFHEKDEKNKYNYTFYTYERN
3IX9 Chain:B ((25-185))
-IVAIWAQDEEGVIGKDNRLPWYLPAELQHFKETTLNHAILMGRVTFDGMGRRLLPKRETLILTRNPEEKIDGVATFHDVQSVLDWYSAQEKNLYIVGGKQIFQAFEPYLDEVIVTHIHARVEGDTYFPAEFDLSLFETVSSKFYTKDEKNPYDFTIQYRKR-
General information:
TITO was launched using:
RESULT:
Template:
3IX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102981 for 1161 contacts (-88.7/contact) +
2D Compatibility (PS) -17008 + (NN) -4848 + (LL) 128
1D Compatibility (HY) -15200 + (ID) 3500
Total energy: -143409.0 ( -123.52 by residue)
QMean score : 0.654
(partial model without unconserved sides chains):
PDB file :
Tito_3IX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IX9-query.scw
PDB file :
Tito_Scwrl_3IX9.pdb
: