Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQVRVLVVDDEDRIRRLLKMYLERENYR-IEEASDGDQALSMALNNNYEVILLDLMMPGKDGIEVCRELRE---FKSTPVVMLTAKGEEANRVQGFEVGADDYIVKPFSPREVVLRVKAVLRRAKQSSEESAGGTPGDIITFPHLKIDNEAHRVIVDGKEIGLTPKEYDLLYYLAKSPDKVFDRESLLKEVWRYEFFGDLRTIDTHVKRLREKLHDVSEDAARMIVTVWGLGYKFEVPED
3OO0 Chain:A ((4-113))
--KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTP----------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57403 for 823 contacts (-69.7/contact) +
2D Compatibility (PS) -12144 + (NN) -11769 + (LL) 9644
1D Compatibility (HY) -10400 + (ID) 1850
Total energy: -83922.0 ( -101.97 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_3OO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OO0-query.scw
PDB file :
Tito_Scwrl_3OO0.pdb
: