Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLVAT--APRVAVLVEYNDREVLEDEVKIKVQFASPKHGTEVVDFRGISPFIDEEFSPEWNLFVSRETNSARGIVFGEFQLGNMVVGEVVERGSKVTEYALGDIVCSY---------------------------GPIMETVIVKAVDNYKLRKLPKGANWKNAVCYD-PAQFAMSGVRD-AHVRAGDYVVVVGLGAIGQIAIQLAKKAGASVVIGVDPLSHRREIAEKHGADATFDPITTDVGLEVKRLTGKLGADSIIETSGNAAALQAALRGIAYGGTISYVAFAKPFPEGFNLGREAHFNNAKIVFSRAASEPNPDYPRWDRKRIEETCWELLMNGYLDCSDIIDPVVPFADSAESYMKYVDQQPDLSIKMGITL |
| 3UOG Chain:A ((28-363)) | MQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNY-RDKLVLETGMGL----------------------DLAFPFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPE-GW--FVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAE-VIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGA-GLGQSLKAVAPDGRISVIGVLEGFEVSGPV-GPLLLKSPVVQGISVG-----------HRRALEDLVGAVDRLGLK--PVIDMRYKFTEVPEALAH-LDRG--PFGKVVIEF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141210 for 2700 contacts (-52.3/contact) +
2D Compatibility (PS) -33066 + (NN) -10458 + (LL) 1188
1D Compatibility (HY) -7600 + (ID) 3750
Total energy: -194896.0 ( -72.18 by residue)
QMean score : 0.453
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