Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLIERLSGRIINRKTGETFHKVFNPPV-----DYKEEDYYQREDDKPETVKRRLDVNIAQGEPILEHYRKLGLVTD-----IEGNQEITEVFADVEKALLELK
3HPR Chain:A ((1-213))
MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQED-CRNGFLLDGFPRTIPQADA----MKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDGTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG---
General information:
TITO was launched using:
RESULT:
Template:
3HPR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48918 for 1577 contacts (-31.0/contact) +
2D Compatibility (PS) -22010 + (NN) -8668 + (LL) 956
1D Compatibility (HY) -15200 + (ID) 4350
Total energy: -98190.0 ( -62.26 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_3HPR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HPR-query.scw
PDB file :
Tito_Scwrl_3HPR.pdb
: