Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEEFLNTHNASILLSAANKSHYPQDDLPEVALAGRSNVGKSSFINTLLGRKNLARTSSKPGKTQLLNF--YN--IDDKLRFVDVPGYGYAKVSKTERAKWGKMIEEYLVTRDNLRVVVSLVDFRHDPSADDIQIYEF-LKYYEIPVIIVATKADKIPRGK-WNKHESSIKKKLNFDKKDHFIVFSSVDRTGLDESWDTILSEL
3IEV Chain:A ((7-179))
------------------------HMKVGYVAIVGKPNVGKSTLLNNLLGT-KVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYEPKKSDVLGHSMVEIAKQSL---EEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGPAKNVLPLIDEIHKKHPE--LTEIVPISALKGANLDELVKTILKYL
General information:
TITO was launched using:
RESULT:
Template:
3IEV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72746 for 1279 contacts (-56.9/contact) +
2D Compatibility (PS) -17816 + (NN) -4638 + (LL) 2084
1D Compatibility (HY) -10000 + (ID) 2450
Total energy: -105566.0 ( -82.54 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_3IEV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IEV-query.scw
PDB file :
Tito_Scwrl_3IEV.pdb
: