Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAQHTIDQTQVIHTKPSALSYKEKTLVMGILNVTPDSFSDGGKYDSLDKALLHAKEMIDDGAHIIDIGGESTRPGAECVSEDEEMSRVIPVIERITKELGVPI-----SVDTYKASVADEAVKAGASI---INDIWGAKHDPKMASVAAEHNVPIVLMHNRPERNYNDLLP-DMLSDLMESVK-IAVEAGVDEKNIILDPGIGFAKTYHDNLAVM-NKLEIFSGLGYPVLLATSRK-RFIGRVLD--LPPEERAEGTGATVCLGIQK-GCDIVRVHDVKQIARMAKMMDAMLNKGGVHHG |
3MCN Chain:B ((191-442)) | ------------------------TIRMGIVNLSNQSFSDGNFDDNQRK--LNLDELIQSGAEIIDIGAESTKPDA-PISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKILAKHHDIIWMINDVECNNIEQK-AQLIAKYNKKYVIIHN-----------IDNVCDYIEQKKQILLKHGIAQQNIYFDIGFGFGK-SDTARYLLENIIEIKRRLELKALVGHSRKPSVLGL--DSNLATLDRA---TRELSRKLEKLDIDIIRVHKI---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69249 for 1617 contacts (-42.8/contact) +
2D Compatibility (PS) -24140 + (NN) -13556 + (LL) 4924
1D Compatibility (HY) -17200 + (ID) 4050
Total energy: -123271.0 ( -76.23 by residue)
QMean score : 0.435
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