Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------MSKAKTLLMSCFLLLSVTACAPKDQAADMDYDQTKKMVVDILK------TDDGKKAIKELLNDDAM------NEALVIDQDAIKGTIEKTLTSKKGEEFWKNIFEDTDFAEGFAKTLQTE------HEKVIKKLMK---DPDYQKMLMSVMQ------DPGMDKKYSQLA--KSQEFRSYLEEVINETLS--SPLYKKQFEDEL-------KKAAKDTAKESE |
2ILR Chain:A ((275-535)) | AESLELPKAIQDQLPRLQQLLKTLEEAPPVELQLLHECSPSQMDLLCAQLQLPQLSDLGLLRLCTWLLALSPDLSLSNATVLTRSLFLGRILSLTSSASRLLTTALTSFAAKYTYPVCSALLDPVLQAPGTGPAQTELLCCLVKMESLEPDAQVLMLGQILELPWKEETFLVLQSLLERQVEMTPEKFSVLMEKLCKTTSMAYAKLMLTVMTKYQANITETQRLGLAMALEPNTTFLRKSLKAALKHLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ILR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9841 for 1274 contacts (7.7/contact) +
2D Compatibility (PS) -19382 + (NN) -6641 + (LL) 0
1D Compatibility (HY) -8000 + (ID) 850
Total energy: -25032.0 ( -19.65 by residue)
QMean score : 0.462
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