Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MKSRGLVRFFFSILAVGALITSIVGFALKW--GEYRGLFLTFEAGQIFSVLFWFIGVGMIFSVISQMGFFVFLTVHRFALEILRSSSLWNLLQLFFILFVAFDLMYVRF-------LFFGESGESLAGYAWLPVFLLIF--GVITAYIKQKQSSKKTFVSSLFLMVVITAL-----EWFPALRVNDEDWLYLMLFPLMACNAFQLLMLPKFAAK--------- |
| 4PCA Chain:A ((6-226)) | HHHMRNVSLSKQDEYLNKLFAVDTEGALKAHKTAPSELRMAQLGTVEGQMLQLLIRMAGIHSIVEVGTCVGFSAICMAHA-----LPSKGHIYTIEKDYENVVTANQNIVNCKLEDKITVLHGEALAQLNTLKEMAPFDMIFIDANKSSYLAYLNWAKMYIRKGGLIVADNTFLFGSVFDEHPTEKVSSNAHASMRAFNDELANKEKYLSTIIPTSEGMMVSIKLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221349 for 1436 contacts (-154.1/contact) +
2D Compatibility (PS) -19654 + (NN) 360 + (LL) 760
1D Compatibility (HY) 2000 + (ID) 1850
Total energy: -239733.0 ( -166.94 by residue)
QMean score : 0.234
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