Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAHTEQYRFPKDFWWGSSASATQMEGAADRDGKGQNIWDYWFEKEPHRFFDHVGPADTSQF----YDNYKEDIRLMKELGHNSFRMSISWSRLIPNGTGEINDKAADFYNNVIDELIANGIEPFVNLFHFDMPMALQKIGGWVNRETVDAYENYARTCFRLFGGRVKKWFTHNEPIVPVEGGYLYDFHYPNKVDFKEAVQVGFHTMLSSARAIQAYREMKQDGKIGIILNLTPSYPRS-SHPADVKAGEIADAFFNRSFLDPSVKGEFPKELVDILKHEGFMPDYNAEDLDIIKKNTVDLLGVNYYQPRRVKAK---EHLPNP--------DAPFLPDRYFDPYVMPGRKM-NPHRGWEIYEKGVYDILINLKENYGNI-ECFISENGMGVEGEERFRDEQGIIQDDYRIEFIKEHLKWIHRAIQEGSNVKGYHLWTFMDNWSWTNAYKNRYGFVSVNLEKDGERTVKKSGKWFKEVAEHSGF
3W53 Chain:A ((40-495))---SQKFAWPKEFLWGSATAAAQIEGAGHSYGKEDSVWDAFARKE-----GAIAGGENLEVAVDHYHRYREDVQLMRELGLDSYRFSTSWARVVPGGR-TVNPEGLDFYSRLVDELLENGILPWLTLYHWDLPQALEERGGWTNRETSYKFLEYAETVHEKLGDRVKHWTTFNEPLCSSLIGYAAGEHAPGRQEPQAALAAVHHQHLAHGLATARLRELGAE-HIGITLNLTNAVPNNPGDPVDLEAARRVDALWNRMYLDPVLRGSYPEDLLEDVQGLGLAEVIEAGDLEIISQ-PIDFLGVNHYHDDNVSGHPLPAGQPQPVVPTDSPKSSPFVGSEYV---TFPARDLPRTAMGWEVNPEGLRVLLNRLNQDYANLPSLYITENGASYTDT---VTEAGTVEDPEREEYILNHLDAVVRAIADGVDVRGYFVWSLLDNFEWAWGYAKRFGIIHVDYQTQ-VRTIKNSGKAY---------


General information:
TITO was launched using:
RESULT:

Template: 3W53.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2602 -166106 -63.84 -379.24
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -63.84
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_3W53.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W53-query.scw
PDB file : Tito_Scwrl_3W53.pdb: