Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKKVVTHPAEVLETPAETVTVFDKKLKKLLDDMYDTMLEMDGVGLAAPQIGILKR----AAVVEIGDDRGRIDLVNPEILEKSGEQTG-IEGCLSFPNVYGDVTRADYVKVRAFNRQGKPFILEARGFLARAVQHEMDHLDGVLFTSKISKYYTEDELADMEG
1RL4 Chain:A ((10-158))----KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWN-----------RIFINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQ------------


General information:
TITO was launched using:
RESULT:

Template: 1RL4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 568 -35704 -62.86 -268.45
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -62.86
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.422

(partial model without unconserved sides chains):
PDB file : Tito_1RL4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RL4-query.scw
PDB file : Tito_Scwrl_1RL4.pdb: