Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTLINRLAKKNIAKTGD-----RPGITTSQQWVKVGKELE--------LLDTPGILWPKFEDELVG-LRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM
4HNU Chain:B ((691-757))------------------------------------------------------------------------------------------------------------------------------------------KISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV-------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4HNU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 130 -19328 -148.67 -364.67
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain B : 0.58

3D Compatibility (PKB) : -148.67
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.689

(partial model without unconserved sides chains):
PDB file : Tito_4HNU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HNU-query.scw
PDB file : Tito_Scwrl_4HNU.pdb: